From 0e19e19382879a606686cb66c9d61ba4dd2ef409 Mon Sep 17 00:00:00 2001 From: EESSI PR Automation Date: Mon, 9 Nov 2026 08:25:52 -0500 Subject: [PATCH 1/3] {2025.06}[foss/2025a] list of single missing packages 20261109082552 --- .../2025.06/eessi-2025.06-eb-5.4.2-2025a.yml | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml index 8cd903a93d..b336d040a6 100644 --- a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml +++ b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml @@ -48,3 +48,13 @@ easyconfigs: - protobuf-31.1-GCCcore-14.2.0.eb - ruamel.yaml-0.18.14-GCCcore-14.2.0.eb - xtb-6.7.1-gfbf-2025a.eb + - ATK-2.38.0-GCCcore-14.2.0.eb + - AmberTools-25.2-foss-2025a-xtb.eb + - Bazel-7.4.1-GCCcore-14.2.0-Java-21.eb + - Clp-1.17.10-foss-2025a.eb + - R-bundle-Bioconductor-3.22-foss-2025a-R-4.5.1.eb + - at-spi2-core-2.56.2-GCCcore-14.2.0.eb + - dm-tree-0.1.10-gfbf-2025a.eb + - ml-collections-1.1.0-foss-2025a.eb + - protobuf-python-6.31.1-GCCcore-14.2.0.eb + - sympy-1.14.0-gfbf-2025a.eb From 286eafb35b3ed72a130ca18998be85c5e285e1f2 Mon Sep 17 00:00:00 2001 From: TopRichard <121792457+TopRichard@users.noreply.github.com> Date: Wed, 11 Nov 2026 08:34:26 +0100 Subject: [PATCH 2/3] Remove Bazel-7.4.1 --- .../software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml | 1 - 1 file changed, 1 deletion(-) diff --git a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml index b336d040a6..9303320fa0 100644 --- a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml +++ b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml @@ -50,7 +50,6 @@ easyconfigs: - xtb-6.7.1-gfbf-2025a.eb - ATK-2.38.0-GCCcore-14.2.0.eb - AmberTools-25.2-foss-2025a-xtb.eb - - Bazel-7.4.1-GCCcore-14.2.0-Java-21.eb - Clp-1.17.10-foss-2025a.eb - R-bundle-Bioconductor-3.22-foss-2025a-R-4.5.1.eb - at-spi2-core-2.56.2-GCCcore-14.2.0.eb From 5b1fb159f9c704b949d7e47065d05c4887fcdbbd Mon Sep 17 00:00:00 2001 From: TopRichard <121792457+TopRichard@users.noreply.github.com> Date: Wed, 11 Nov 2026 08:37:40 +0100 Subject: [PATCH 3/3] Add Bazel-7.4.1 and try building again --- .../software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml index 9303320fa0..b336d040a6 100644 --- a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml +++ b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.4.2-2025a.yml @@ -50,6 +50,7 @@ easyconfigs: - xtb-6.7.1-gfbf-2025a.eb - ATK-2.38.0-GCCcore-14.2.0.eb - AmberTools-25.2-foss-2025a-xtb.eb + - Bazel-7.4.1-GCCcore-14.2.0-Java-21.eb - Clp-1.17.10-foss-2025a.eb - R-bundle-Bioconductor-3.22-foss-2025a-R-4.5.1.eb - at-spi2-core-2.56.2-GCCcore-14.2.0.eb